Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019297.1 Corchorus olitorius cultivar O-4 contig19330, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6609

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
688--758
21
3.4
21
94
3
117
26
26
18
28
1.98
1814--1918
41
2.6
40
81
4
111
24
13
14
47
1.80
2993--3024
6
5.3
6
100
0
64
50
34
0
15
1.45
3054--3239
38
4.9
38
93
1
302
23
34
18
23
1.96

Tables:   1

The End!