Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019300.1 Corchorus olitorius cultivar O-4 contig19333, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12733

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2059--2155
41
2.4
40
76
11
99
48
15
11
24
1.78
4475--4525
19
2.7
19
81
3
68
39
29
17
13
1.88
4840--4935
26
3.6
26
90
4
138
43
26
15
14
1.85
8025--8089
33
2.0
33
87
0
94
26
9
21
43
1.82
8036--8135
33
3.0
32
84
8
112
26
9
22
43
1.82
9944--9986
21
2.1
20
91
4
68
32
13
25
27
1.94

Tables:   1

The End!