Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019307.1 Corchorus olitorius cultivar O-4 contig19340, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4955

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
464--510
26
1.9
24
87
12
69
27
27
4
40
1.75
1247--1278
15
2.1
15
100
0
64
50
28
6
15
1.68
1864--1990
66
1.9
66
85
3
175
25
7
22
43
1.80
1876--2005
33
3.9
33
76
4
129
26
7
21
44
1.79
3765--3814
21
2.4
21
90
6
75
28
18
26
28
1.98
4633--4955
154
2.1
154
93
1
549
41
18
19
20
1.91

Tables:   1

The End!