Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019314.1 Corchorus olitorius cultivar O-4 contig19347, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8979

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--578
22
2.0
22
81
9
52
16
9
11
62
1.53
2975--3030
27
2.1
27
83
6
69
41
14
8
35
1.77
4613--4644
11
2.9
11
90
0
55
81
15
3
0
0.82
4296--5036
390
1.9
379
87
6
1074
38
15
13
32
1.87
8263--8339
30
2.5
31
85
2
102
25
28
16
28
1.97

Tables:   1

The End!