Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019326.1 Corchorus olitorius cultivar O-4 contig19359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4677

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1874--2109
4
61.5
4
65
15
79
27
7
0
64
1.23
1880--1941
19
3.4
18
72
22
58
29
8
0
62
1.23
1880--2109
44
5.2
44
86
3
293
26
7
0
64
1.24
1876--2086
87
2.4
88
87
6
295
27
8
0
64
1.21
2017--2109
27
3.8
24
71
23
63
25
5
1
67
1.18
2034--2120
32
2.7
32
77
12
88
28
4
1
65
1.19
2132--2190
24
2.5
24
86
5
84
23
18
1
55
1.51
2135--2190
8
7.0
8
72
8
51
23
17
1
57
1.50
2132--2197
24
2.7
25
74
4
64
22
16
1
59
1.46

Tables:   1

The End!