Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019350.1 Corchorus olitorius cultivar O-4 contig19383, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41061

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
964--1847
296
3.0
293
90
1
1378
43
16
15
24
1.87
2647--2861
109
2.0
109
97
0
403
30
11
14
43
1.80
18805--18910
31
3.5
31
67
14
94
33
18
19
28
1.96
18942--19106
59
2.8
59
77
11
167
30
16
13
38
1.88
40325--40349
12
2.1
12
100
0
50
40
0
8
52
1.31
40771--40812
2
21.0
2
100
0
84
50
0
0
50
1.00

Tables:   1

The End!