Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019352.1 Corchorus olitorius cultivar O-4 contig19385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18669

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15--54
16
2.5
16
91
0
62
45
0
27
27
1.54
275--355
35
2.3
36
85
10
105
12
40
39
7
1.71
1240--1303
28
2.3
29
81
7
71
29
21
12
35
1.91
1691--1747
12
4.8
12
73
16
55
36
3
8
50
1.50
2773--2819
25
1.9
24
95
4
85
29
6
8
55
1.55
3646--3715
36
1.9
36
88
0
104
58
8
10
22
1.57
4977--5092
59
2.0
58
88
5
171
31
19
14
33
1.92
9466--9490
12
2.1
12
100
0
50
0
0
8
92
0.40
15655--15697
1
43.0
1
90
0
68
2
2
0
95
0.32

Tables:   1

The End!