Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019358.1 Corchorus olitorius cultivar O-4 contig19391, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14653

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--1233
322
3.8
320
79
8
1240
33
14
16
35
1.89
3781--3813
6
5.8
6
89
10
52
87
0
12
0
0.53
3781--3813
11
2.9
12
91
8
52
87
0
12
0
0.53
3781--3813
17
1.9
17
93
0
57
87
0
12
0
0.53
4732--4775
22
2.0
22
86
8
63
22
31
20
25
1.98
6118--6164
16
2.9
16
81
6
51
25
8
6
59
1.50
13943--13987
20
2.2
20
100
0
90
37
0
31
31
1.58

Tables:   1

The End!