Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019367.1 Corchorus olitorius cultivar O-4 contig19400, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20597

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--197
22
8.6
22
78
6
156
36
8
16
38
1.80
275--323
22
2.2
22
88
0
71
51
4
14
30
1.61
3243--3441
22
9.1
22
70
13
117
39
9
15
36
1.78
11732--11763
16
2.0
17
88
11
50
3
37
0
59
1.13
16123--16162
20
2.0
20
100
0
80
40
20
5
35
1.74
20555--20594
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!