Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019374.1 Corchorus olitorius cultivar O-4 contig19407, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20015

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
161--217
22
2.6
22
86
5
71
38
7
15
38
1.75
184--226
22
2.0
22
90
0
68
41
6
16
34
1.75
15342--15379
2
19.0
2
100
0
76
50
0
0
50
1.00
16216--16264
17
2.9
16
82
8
62
36
20
18
24
1.94
16862--17045
96
1.9
96
95
2
334
46
11
17
23
1.82
18653--18998
180
1.9
180
94
0
611
38
13
7
40
1.72
19451--19520
36
1.9
36
91
0
113
21
10
8
60
1.55

Tables:   1

The End!