Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019377.1 Corchorus olitorius cultivar O-4 contig19410, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36431

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4678--4732
29
1.9
28
92
3
92
25
21
10
41
1.86
4678--4742
29
2.2
28
84
7
85
26
20
13
40
1.89
4878--4961
29
2.8
28
77
16
80
50
10
15
23
1.75
23537--23611
28
2.8
26
87
6
105
18
14
25
41
1.89
24912--25073
80
2.0
81
93
1
281
25
47
1
25
1.59
27868--27892
13
1.9
13
100
0
50
40
0
0
60
0.97
29155--29230
31
2.6
29
81
10
82
43
10
15
30
1.81
29358--29394
18
2.0
19
89
5
58
62
0
0
37
0.96
29362--29406
4
11.8
4
83
9
58
53
2
0
44
1.13
30477--30543
33
2.0
33
91
0
107
14
2
26
55
1.54
36112--36169
27
2.1
27
84
6
73
43
6
3
46
1.47

Tables:   1

The End!