Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019378.1 Corchorus olitorius cultivar O-4 contig19411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17812

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1679--1908
22
10.5
22
73
8
155
42
9
13
34
1.77
1696--1932
44
5.4
45
74
8
202
42
9
13
35
1.77
1767--1933
88
1.9
88
85
2
228
41
9
13
34
1.77
1985--2594
22
28.0
22
69
13
210
38
9
15
36
1.80
2033--2327
66
4.5
65
77
11
248
39
9
15
35
1.80
2557--2609
22
2.4
22
87
6
72
49
5
11
33
1.62
9950--9976
12
2.2
12
100
0
54
92
0
7
0
0.38
11686--11714
13
2.2
13
100
0
58
62
0
6
31
1.22
11781--11826
21
2.2
21
100
0
92
17
8
4
69
1.31
17595--17659
31
2.1
31
94
0
112
41
15
9
33
1.79

Tables:   1

The End!