Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019385.1 Corchorus olitorius cultivar O-4 contig19418, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34096

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--52
2
25.5
2
92
3
86
48
3
0
48
1.20
374--431
28
2.1
28
83
0
71
34
10
10
44
1.73
2414--2462
24
2.0
24
84
7
64
63
0
6
30
1.19
6010--6051
22
2.0
21
85
4
57
9
7
2
80
0.97
11657--11690
17
2.0
17
94
0
59
55
17
8
17
1.66
25424--25449
1
26.0
1
100
0
52
100
0
0
0
0.00
26852--26900
23
2.1
23
100
0
98
22
28
16
32
1.95
26852--26912
23
2.7
23
89
0
68
24
26
14
34
1.94
30690--30761
25
3.0
24
76
21
71
23
11
5
59
1.52
31227--31251
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!