Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019404.1 Corchorus olitorius cultivar O-4 contig19437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42456

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4772--5960
336
3.6
328
80
7
1206
34
13
14
37
1.86
6285--7761
337
4.4
330
77
7
1358
33
13
15
36
1.88
7600--8137
281
1.9
280
81
8
648
34
12
15
38
1.84
7307--8425
612
1.8
611
82
6
1448
33
13
15
37
1.87
7881--8702
331
2.5
331
86
3
1059
33
14
14
36
1.87
27179--27214
2
18.0
2
88
0
54
55
0
44
0
0.99
27180--27215
12
3.0
12
100
0
72
58
0
41
0
0.98
38746--38784
18
2.2
18
100
0
78
48
10
5
35
1.59
39147--39173
13
2.1
13
100
0
54
44
0
7
48
1.31
42418--42456
2
19.5
2
100
0
78
51
0
0
48
1.00

Tables:   1

The End!