Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019406.1 Corchorus olitorius cultivar O-4 contig19439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21221

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6324--7555
330
3.7
329
79
8
1054
38
15
12
33
1.85
10524--10558
18
2.0
18
94
5
63
51
0
8
40
1.33
11115--11193
29
2.6
29
82
6
86
18
24
16
40
1.91
11140--11215
29
2.5
30
89
4
109
18
23
17
40
1.91
11315--11383
29
2.3
30
85
2
86
42
11
26
20
1.86
14788--14831
23
1.9
23
100
0
88
31
22
18
27
1.97
19373--19479
43
2.5
43
92
0
169
16
28
14
40
1.89
19932--20172
121
2.0
122
85
2
324
14
20
22
43
1.87
20237--20610
81
4.6
81
93
1
597
36
6
27
29
1.81
20237--20610
41
9.2
41
93
1
594
36
6
27
29
1.81

Tables:   1

The End!