Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019409.1 Corchorus olitorius cultivar O-4 contig19442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47080

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--98
39
2.4
39
98
0
175
27
10
17
44
1.82
2016--2099
33
2.5
33
84
0
105
21
32
27
19
1.97
2148--2290
71
2.0
71
98
0
277
44
9
31
14
1.76
18067--18111
21
2.1
21
95
0
81
11
15
20
53
1.72
19044--19080
17
2.2
17
90
0
56
21
18
8
51
1.72
24865--24925
32
1.9
32
90
6
97
49
6
18
26
1.71
45810--47080
319
3.9
321
88
3
1804
35
18
14
31
1.91

Tables:   1

The End!