Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019410.1 Corchorus olitorius cultivar O-4 contig19443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5409

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
674--2593
324
6.0
322
89
3
2893
35
18
14
31
1.91
2435--2760
167
2.0
162
86
4
456
35
22
13
28
1.92
2110--3074
485
2.0
486
92
1
1623
34
20
14
30
1.92
1803--3387
798
2.0
792
88
4
2354
34
20
14
31
1.92
2595--5409
715
4.3
637
76
11
2446
32
16
17
33
1.92
2607--3982
322
4.3
318
89
5
1989
34
18
15
31
1.92
3980--4303
7
46.7
7
81
9
369
16
0
37
45
1.47
4310--5409
322
3.4
323
92
1
1807
35
18
14
32
1.90

Tables:   1

The End!