Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019417.1 Corchorus olitorius cultivar O-4 contig19450, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19686

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65--997
315
2.9
322
81
10
903
31
15
17
35
1.91
2059--2147
43
2.1
43
97
0
169
55
11
6
26
1.60
3211--3275
33
2.0
33
87
0
94
18
20
18
43
1.89
7384--7425
22
1.9
22
100
0
84
9
23
57
9
1.60
8243--8312
33
2.1
33
83
0
86
21
27
32
18
1.97
8384--8476
33
2.8
33
79
6
91
12
27
39
19
1.88
9727--9779
16
3.3
16
97
0
97
43
16
24
15
1.87
13702--13956
131
2.0
127
87
6
374
37
11
1
49
1.50
16516--16568
25
2.1
25
89
0
79
28
13
1
56
1.47
16773--16807
17
2.1
17
100
0
70
57
11
11
20
1.64
17123--19686
332
7.7
331
88
2
3570
33
14
15
36
1.88
17123--19682
999
2.6
990
88
3
3756
33
14
15
36
1.88
17123--19686
666
3.9
660
88
3
3540
33
14
15
36
1.88

Tables:   1

The End!