Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019425.1 Corchorus olitorius cultivar O-4 contig19458, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13573

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31--1802
329
5.4
328
78
8
1457
33
17
15
34
1.90
2147--4211
326
6.3
328
76
7
1530
35
16
14
33
1.89
6125--6200
21
3.7
21
70
10
66
28
27
6
36
1.82
6102--6266
41
4.1
40
88
5
226
29
26
7
36
1.85
6115--6266
80
1.9
80
89
5
234
28
27
7
36
1.85
6246--6461
33
6.5
33
96
1
396
35
26
6
31
1.82
6246--6461
67
3.2
66
96
1
396
35
26
6
31
1.82
6246--6461
100
2.2
100
100
0
432
35
26
6
31
1.82
12375--13462
326
3.3
325
80
5
1079
36
15
14
33
1.88
12920--13543
326
1.9
324
81
6
724
36
16
13
33
1.88

Tables:   1

The End!