Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019430.1 Corchorus olitorius cultivar O-4 contig19463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12735

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--86
19
4.1
18
78
16
86
26
11
0
62
1.29
17--88
8
9.0
8
74
17
60
25
9
0
65
1.23
4--109
15
7.3
15
66
25
66
28
10
0
61
1.29
53--109
27
2.1
27
87
6
80
29
8
0
61
1.26
8--122
19
6.5
17
68
29
64
27
13
0
59
1.35
179--232
16
3.4
16
79
5
56
24
18
1
55
1.52
176--230
24
2.3
24
81
6
67
25
20
1
52
1.56
9916--9959
21
2.1
21
87
8
63
25
2
9
63
1.35
10365--10453
40
2.3
37
76
16
90
33
10
8
47
1.69

Tables:   1

The End!