Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019454.1 Corchorus olitorius cultivar O-4 contig19487, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11379

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
730--775
21
2.2
21
81
11
51
60
4
4
30
1.35
1586--1633
21
2.2
22
88
3
71
58
12
14
14
1.64
2930--2987
24
2.4
24
82
0
62
43
3
1
51
1.28
4523--4569
2
23.5
2
91
8
78
48
0
2
48
1.13
5045--5083
13
3.0
13
88
7
53
58
20
7
12
1.58

Tables:   1

The End!