Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019457.1 Corchorus olitorius cultivar O-4 contig19490, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9886

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
884--1794
451
2.0
454
97
1
1740
32
12
14
40
1.83
1838--1869
16
2.0
16
93
0
55
43
6
3
46
1.44
3480--3554
32
2.2
35
81
16
111
36
12
0
52
1.39
3494--3557
32
2.0
32
100
0
128
34
15
0
50
1.45
6381--6492
51
2.2
51
81
16
126
17
22
11
48
1.79
7910--7949
2
19.5
2
84
5
53
45
7
0
47
1.31
8165--8244
39
2.0
40
92
2
135
51
7
5
36
1.52
8355--8764
204
2.0
201
94
1
721
36
10
8
44
1.70
9285--9353
35
1.9
36
91
2
113
59
8
10
21
1.57

Tables:   1

The End!