Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019480.1 Corchorus olitorius cultivar O-4 contig19513, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46430

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2197--2290
45
2.2
43
83
7
111
36
22
7
34
1.82
22021--22069
17
2.9
16
85
8
62
22
20
22
34
1.97
23972--24022
24
2.1
26
82
13
65
50
1
5
41
1.37
23976--24029
26
2.2
23
77
9
54
50
1
5
42
1.36
32277--32309
8
4.1
8
100
0
66
0
12
0
87
0.53
44817--44844
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!