Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019486.1 Corchorus olitorius cultivar O-4 contig19519, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6444

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6--66
22
2.8
21
82
9
68
29
13
19
37
1.90
2197--2449
138
1.8
140
87
5
386
36
11
1
50
1.48
3908--3972
31
2.1
31
85
2
87
32
16
3
47
1.62
4616--4767
45
3.6
45
72
20
166
32
7
31
28
1.84
4580--4839
78
3.4
78
93
3
424
31
6
31
30
1.83
4657--4722
33
2.0
33
90
0
105
30
6
31
31
1.82
4735--4800
33
2.0
33
93
0
114
30
6
30
33
1.82
4764--4837
21
3.7
21
72
17
84
29
6
33
29
1.83

Tables:   1

The End!