Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019488.1 Corchorus olitorius cultivar O-4 contig19521, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26591

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
415--462
3
16.0
3
100
0
96
66
33
0
0
0.92
13192--13351
31
5.3
31
81
2
137
34
26
22
16
1.95
13199--13317
62
1.9
62
84
0
157
36
25
20
18
1.95
14217--14251
17
2.0
18
88
5
54
28
34
2
34
1.72
15812--15896
45
1.9
43
92
4
143
40
3
32
23
1.72
18418--18442
2
12.5
2
100
0
50
48
0
0
52
1.00
19755--19820
31
2.1
31
88
5
98
30
19
15
34
1.93
19891--19957
29
2.2
29
81
5
80
31
5
22
40
1.78

Tables:   1

The End!