Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019493.1 Corchorus olitorius cultivar O-4 contig19526, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33451

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
182--232
22
2.2
24
83
16
72
41
0
0
58
0.98
182--230
25
2.0
25
84
8
64
40
0
0
59
0.98
5309--5344
13
2.7
13
91
4
54
33
5
19
41
1.75
5831--5909
22
3.6
22
74
6
72
43
16
7
32
1.76
8256--8293
19
2.1
18
95
5
67
42
15
26
15
1.87
9896--10063
22
7.5
22
73
14
96
41
8
12
38
1.73
9988--10034
24
2.0
23
87
4
67
42
4
12
40
1.63
10775--10808
13
2.6
13
85
0
50
32
23
5
38
1.79
10834--10864
10
2.9
11
90
9
55
35
25
9
29
1.88
27871--28594
332
2.2
334
83
5
903
31
15
16
35
1.90

Tables:   1

The End!