Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019513.1 Corchorus olitorius cultivar O-4 contig19546, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41313

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3551--3641
36
2.6
35
92
3
148
3
38
41
16
1.65
9210--9305
46
2.1
46
98
0
183
25
19
26
29
1.99
11782--11831
15
3.3
15
85
0
64
42
12
26
20
1.86
17921--17956
18
2.0
19
89
10
58
33
16
8
41
1.78
18541--18619
23
3.3
24
78
16
69
68
1
13
16
1.28
24455--24481
13
2.1
13
100
0
54
29
7
14
48
1.71
26682--26988
163
1.9
163
88
1
472
45
15
18
20
1.85
30998--31024
13
2.1
13
100
0
54
37
7
33
22
1.82
32027--32067
8
5.0
8
82
5
55
85
14
0
0
0.60
32027--32067
20
2.0
20
90
0
64
85
14
0
0
0.60
35749--35786
12
2.9
13
80
11
51
68
0
21
10
1.19
36946--36970
13
1.9
13
100
0
50
12
24
16
48
1.79

Tables:   1

The End!