Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019518.1 Corchorus olitorius cultivar O-4 contig19551, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9372

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--28
2
14.0
2
100
0
56
50
0
0
50
1.00
1218--1250
15
2.2
15
89
10
50
66
0
18
15
1.25
1256--1637
68
5.7
67
85
3
441
21
20
15
42
1.89
1257--1645
136
2.9
133
86
5
489
21
20
15
42
1.88
4342--4605
145
1.8
145
94
0
474
29
20
17
32
1.95
6281--6309
15
2.0
15
93
6
51
27
0
0
72
0.85
7123--7180
19
3.0
19
74
2
53
13
32
34
18
1.91
7915--7961
13
3.7
13
83
16
71
23
17
0
59
1.37
7916--7963
25
1.9
25
100
0
96
22
16
0
60
1.36

Tables:   1

The End!