Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019533.1 Corchorus olitorius cultivar O-4 contig19566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26141

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
284--544
41
6.4
41
94
0
432
26
15
13
45
1.82
284--577
123
2.4
123
87
3
369
27
13
13
44
1.82
5592--5634
22
2.0
22
90
0
68
20
23
34
20
1.96
14557--14581
11
2.3
11
100
0
50
92
0
8
0
0.40
16456--16486
15
2.1
15
100
0
62
51
0
0
48
1.00
16462--16486
13
1.9
13
100
0
50
52
0
0
48
1.00
19294--19351
18
3.4
16
75
13
53
13
6
22
56
1.61
22341--22366
2
13.0
2
100
0
52
50
0
0
50
1.00
23529--23567
18
2.2
18
100
0
78
61
10
5
23
1.48
23810--24356
273
2.0
274
94
1
974
25
19
11
43
1.85

Tables:   1

The End!