Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019534.1 Corchorus olitorius cultivar O-4 contig19567, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39089

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
134--216
30
3.0
27
83
10
112
49
3
3
43
1.37
492--521
6
4.8
6
95
4
51
50
0
13
36
1.42
8590--8633
24
2.0
22
86
13
63
50
4
27
18
1.66
8877--8903
13
2.1
13
100
0
54
0
18
0
81
0.69
9213--9296
31
2.7
31
83
7
116
32
16
9
41
1.81
11926--11974
23
2.1
23
84
0
62
30
8
16
44
1.76
13106--13132
2
13.5
2
100
0
54
48
0
0
51
1.00
24434--24477
4
11.2
4
80
4
54
31
0
0
68
0.90
24434--24477
19
2.3
19
92
4
70
31
0
0
68
0.90
24384--24590
103
2.0
103
98
0
396
29
10
11
49
1.71
35021--35047
11
2.5
11
100
0
54
7
7
0
85
0.75
35003--35039
14
2.6
14
91
0
56
2
10
2
83
0.84
37440--37478
18
2.2
18
100
0
78
61
10
5
23
1.48
37721--38266
273
2.0
273
97
0
1038
25
19
11
43
1.84

Tables:   1

The End!