Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019537.1 Corchorus olitorius cultivar O-4 contig19570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14680

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2808--2844
19
1.9
19
94
0
65
67
8
10
13
1.41
3470--3552
30
3.0
27
83
10
112
49
3
3
43
1.37
3824--3857
2
17.0
2
88
11
52
47
0
2
50
1.16
6062--6098
19
1.9
19
94
0
65
35
16
10
37
1.83
12628--12772
37
3.9
36
78
7
166
40
15
15
28
1.88
12565--12771
37
5.6
37
76
11
133
39
16
16
27
1.90
12628--12771
73
1.9
75
90
2
229
40
15
15
27
1.88
14281--14373
48
2.0
47
82
6
116
53
5
15
25
1.62
14637--14669
10
3.3
10
91
8
50
48
6
15
30
1.69

Tables:   1

The End!