Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019546.1 Corchorus olitorius cultivar O-4 contig19579, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13631

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3818--3866
6
7.7
6
84
11
62
79
14
2
4
0.97
3810--3867
26
2.2
27
81
12
75
77
13
1
6
1.05
3810--3867
20
2.9
19
87
7
71
77
13
1
6
1.05
5918--6021
31
3.4
31
67
19
92
32
19
21
26
1.97
5904--6020
60
2.0
60
94
0
207
30
18
20
29
1.97
6060--6227
31
5.6
28
71
16
106
27
19
19
34
1.95
6059--6223
60
2.8
60
86
7
253
26
19
18
35
1.95
6091--6192
29
3.4
29
71
19
102
28
19
17
34
1.95

Tables:   1

The End!