Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019548.1 Corchorus olitorius cultivar O-4 contig19581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4585

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2992--3031
19
2.1
19
85
0
53
37
2
0
60
1.11
3529--3578
2
24.0
2
84
15
66
48
4
2
46
1.32
3531--3581
25
2.0
25
100
0
102
47
3
3
45
1.40
3858--3941
15
5.9
14
69
18
57
40
2
3
53
1.31
3856--3938
30
3.0
27
86
10
130
40
3
3
51
1.37
3858--3939
9
8.8
9
71
17
60
40
2
3
53
1.32

Tables:   1

The End!