Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019550.1 Corchorus olitorius cultivar O-4 contig19583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22471

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1682--1862
93
1.9
93
92
0
299
49
2
12
34
1.55
6143--6185
21
2.1
21
91
4
70
23
20
18
37
1.94
6146--6191
21
2.3
20
85
10
60
21
26
15
36
1.93
19633--19814
36
5.2
36
73
14
166
17
0
58
24
1.43
19619--19814
102
1.9
101
85
8
272
15
1
57
25
1.45
20824--20856
3
10.7
3
93
6
57
33
0
0
66
0.92
21195--21282
17
5.1
17
77
13
81
35
3
3
57
1.32
21233--21257
13
1.9
13
100
0
50
48
4
0
48
1.20
21233--21269
15
2.5
15
90
0
56
43
2
0
54
1.14
21188--21288
53
1.9
53
95
0
184
34
3
4
56
1.39
21411--21441
2
15.5
2
93
0
53
48
0
0
51
1.00

Tables:   1

The End!