Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019553.1 Corchorus olitorius cultivar O-4 contig19586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13277

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1889--1934
22
2.1
22
95
0
83
15
8
4
71
1.26
4044--4199
72
2.2
72
79
6
156
30
19
22
27
1.98
10413--10495
42
2.0
43
88
7
125
22
19
22
34
1.96
10483--10525
20
2.1
21
86
4
61
39
20
18
20
1.93
10988--11019
12
2.7
12
95
0
55
50
31
18
0
1.48
11646--11673
3
9.3
3
100
0
56
35
0
64
0
0.94

Tables:   1

The End!