Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019569.1 Corchorus olitorius cultivar O-4 contig19602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10381

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
542--598
3
19.0
3
100
0
114
66
0
0
33
0.92
1626--1651
11
2.4
11
100
0
52
0
7
0
92
0.39
10046--10089
6
6.8
6
85
14
61
36
13
0
50
1.42
10045--10096
21
2.6
20
93
6
88
38
11
0
50
1.39
10046--10097
27
1.9
27
96
0
95
38
11
0
50
1.39

Tables:   1

The End!