Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019572.1 Corchorus olitorius cultivar O-4 contig19605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69434

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13924--13958
17
2.1
17
94
0
61
20
8
17
54
1.68
14794--14855
21
2.8
22
95
4
108
20
19
0
59
1.38
18388--18443
27
2.1
27
100
0
112
53
14
10
21
1.70
18379--18457
27
2.7
30
82
15
110
53
12
11
22
1.71
20081--20226
32
4.5
32
90
5
213
32
26
17
23
1.96
20348--20453
24
4.2
24
80
11
122
26
22
28
22
1.99
20355--20436
29
3.0
28
86
11
109
21
21
31
24
1.98
20646--20703
22
2.7
21
86
7
80
44
20
12
22
1.84
33934--33976
21
2.2
20
84
16
54
2
16
9
72
1.21
34344--34387
23
1.9
23
86
9
63
9
4
27
59
1.48
48768--48882
56
2.1
56
98
0
221
13
19
20
46
1.83
60905--60978
37
2.0
37
94
0
130
54
10
22
12
1.68
64040--64118
15
5.0
15
70
11
59
58
2
0
39
1.12

Tables:   1

The End!