Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWUE01019578.1 Corchorus olitorius cultivar O-4 contig19611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 14122
ACGTcount: A:0.32, C:0.19, G:0.16, T:0.32
Found at i:1653 original size:21 final size:21
Alignment explanation
Indices: 1629--1748 Score: 86
Period size: 22 Copynumber: 5.6 Consensus size: 21
1619 TTTGATAACC
*
1629 AATTTTGATAATTACCTATGA
1 AATTTTGATAACTACCTATGA
*
1650 AATTGTGATAAACT-CCATATGA
1 AATTTTGAT-AACTACC-TATGA
* *
1672 AACTTTGATAACCTAACTATGA
1 AATTTTGATAA-CTACCTATGA
*
1694 AATTTT-ATTAAACCTTCCTATGA
1 AATTTTGA-T-AA-CTACCTATGA
*
1717 AATTTT-ATAACCTCCCTATG-
1 AATTTTGATAA-CTACCTATGA
*
1737 AGTTTTGATAAC
1 AATTTTGATAAC
1749 CTCCCTGTAA
Statistics
Matches: 82, Mismatches: 10, Indels: 15
0.77 0.09 0.14
Matches are distributed among these distances:
20 6 0.07
21 28 0.34
22 29 0.35
23 19 0.23
ACGTcount: A:0.37, C:0.16, G:0.09, T:0.38
Consensus pattern (21 bp):
AATTTTGATAACTACCTATGA
Found at i:1653 original size:34 final size:35
Alignment explanation
Indices: 1594--1660 Score: 109
Period size: 34 Copynumber: 1.9 Consensus size: 35
1584 ATTTTTATGA
* *
1594 AATTTTGATAATTACCCTATTAAATTTTGATAACC
1 AATTTTGATAATTACCCTATGAAATTGTGATAACC
1629 AATTTTGATAATTA-CCTATGAAATTGTGATAA
1 AATTTTGATAATTACCCTATGAAATTGTGATAA
1661 ACTCCATATG
Statistics
Matches: 30, Mismatches: 2, Indels: 1
0.91 0.06 0.03
Matches are distributed among these distances:
34 16 0.53
35 14 0.47
ACGTcount: A:0.39, C:0.10, G:0.09, T:0.42
Consensus pattern (35 bp):
AATTTTGATAATTACCCTATGAAATTGTGATAACC
Found at i:1692 original size:22 final size:21
Alignment explanation
Indices: 1667--1729 Score: 72
Period size: 23 Copynumber: 2.9 Consensus size: 21
1657 ATAAACTCCA
*
1667 TATGAAACTTTGATAACCTAAC
1 TATGAAA-TTTTATAACCTAAC
**
1689 TATGAAATTTTATTAAACCTTCC
1 TATGAAATTTTA-T-AACCTAAC
1712 TATGAAATTTTATAACCT
1 TATGAAATTTTATAACCT
1730 CCCTATGAGT
Statistics
Matches: 36, Mismatches: 3, Indels: 5
0.82 0.07 0.11
Matches are distributed among these distances:
21 9 0.25
22 9 0.25
23 18 0.50
ACGTcount: A:0.38, C:0.16, G:0.06, T:0.40
Consensus pattern (21 bp):
TATGAAATTTTATAACCTAAC
Found at i:1736 original size:44 final size:44
Alignment explanation
Indices: 1632--1737 Score: 112
Period size: 44 Copynumber: 2.4 Consensus size: 44
1622 GATAACCAAT
*
1632 TTTGATAA-TTACCTATGAAATTGTGATAAACTCCATATGAAAC
1 TTTGATAACCTACCTATGAAATTGTGATAAACTCCATATGAAAC
* *
1675 TTTGATAACCTAACTATGAAATT-TTATTAAACCTTCC-TATGAAA-
1 TTTGATAACCTACCTATGAAATTGTGA-TAAA-C-TCCATATGAAAC
* *
1719 TTTTATAACCTCCCTATGA
1 TTTGATAACCTACCTATGA
1738 GTTTTGATAA
Statistics
Matches: 53, Mismatches: 6, Indels: 7
0.80 0.09 0.11
Matches are distributed among these distances:
43 10 0.19
44 32 0.60
45 8 0.15
46 3 0.06
ACGTcount: A:0.37, C:0.17, G:0.08, T:0.38
Consensus pattern (44 bp):
TTTGATAACCTACCTATGAAATTGTGATAAACTCCATATGAAAC
Found at i:1749 original size:21 final size:21
Alignment explanation
Indices: 1643--1754 Score: 100
Period size: 21 Copynumber: 5.1 Consensus size: 21
1633 TTGATAATTA
* *
1643 CCTATGAAATTGTGATAAACTC
1 CCTATGAAATT-TTATAACCTC
* * *
1665 CATATGAAACTTTGATAACCTA
1 CCTATGAAA-TTTTATAACCTC
* *
1687 ACTATGAAATTTTATTAAACCTT
1 CCTATGAAATTTTA-T-AACCTC
1710 CCTATGAAATTTTATAACCTC
1 CCTATGAAATTTTATAACCTC
*
1731 CCTATG-AGTTTTGATAACCTC
1 CCTATGAAATTTT-ATAACCTC
1752 CCT
1 CCT
1755 GTAAGATTTT
Statistics
Matches: 76, Mismatches: 10, Indels: 9
0.80 0.11 0.09
Matches are distributed among these distances:
20 5 0.07
21 26 0.34
22 25 0.33
23 20 0.26
ACGTcount: A:0.34, C:0.21, G:0.09, T:0.37
Consensus pattern (21 bp):
CCTATGAAATTTTATAACCTC
Found at i:4489 original size:69 final size:69
Alignment explanation
Indices: 4378--4512 Score: 202
Period size: 69 Copynumber: 2.0 Consensus size: 69
4368 AGCTAACAAA
*
4378 TAAGGAAAAAATAGTGGAAACACTATTAATTACATCTCAATGCTAAAATTACATATAAAGACAAT
1 TAAGGAAAAAATAGTGGAAACACCATTAATTACATCTCAATGCTAAAATTACATATAAAGACAAT
4443 GGAC
66 GGAC
* * *
4447 TAAGGAAAAAATGGTAGG-AACACCATTAATTTCATC-CAAATGCTAAAATTACATCTAAAGACA
1 TAAGGAAAAAATAGT-GGAAACACCATTAATTACATCTC-AATGCTAAAATTACATATAAAGACA
4510 ATG
64 ATG
4513 CATTTCAAGC
Statistics
Matches: 60, Mismatches: 4, Indels: 4
0.88 0.06 0.06
Matches are distributed among these distances:
68 1 0.02
69 57 0.95
70 2 0.03
ACGTcount: A:0.48, C:0.14, G:0.13, T:0.24
Consensus pattern (69 bp):
TAAGGAAAAAATAGTGGAAACACCATTAATTACATCTCAATGCTAAAATTACATATAAAGACAAT
GGAC
Found at i:5648 original size:20 final size:20
Alignment explanation
Indices: 5615--5653 Score: 53
Period size: 20 Copynumber: 1.9 Consensus size: 20
5605 CATAGATGAA
*
5615 ATTTTCAGAAATTATTATTT
1 ATTTTCAGAAATTAGTATTT
5635 ATTTTCA-AATATTAGTATT
1 ATTTTCAGAA-ATTAGTATT
5654 GAATTAGGGT
Statistics
Matches: 17, Mismatches: 1, Indels: 2
0.85 0.05 0.10
Matches are distributed among these distances:
19 2 0.12
20 15 0.88
ACGTcount: A:0.36, C:0.05, G:0.05, T:0.54
Consensus pattern (20 bp):
ATTTTCAGAAATTAGTATTT
Found at i:5681 original size:16 final size:16
Alignment explanation
Indices: 5660--5727 Score: 68
Period size: 16 Copynumber: 4.3 Consensus size: 16
5650 TATTGAATTA
*
5660 GGGTTTTTTCTGGTTC
1 GGGTTTTTTCGGGTTC
*
5676 GGGTTTTATCGGGTTTC
1 GGGTTTTTTCGGG-TTC
* * *
5693 -AGATTTTTCGAGTTC
1 GGGTTTTTTCGGGTTC
5708 GGGTTTTTT-GGGTTC
1 GGGTTTTTTCGGGTTC
5723 GGGTT
1 GGGTT
5728 CAGGCGGGTT
Statistics
Matches: 41, Mismatches: 9, Indels: 5
0.75 0.16 0.09
Matches are distributed among these distances:
15 13 0.32
16 25 0.61
17 3 0.07
ACGTcount: A:0.06, C:0.10, G:0.34, T:0.50
Consensus pattern (16 bp):
GGGTTTTTTCGGGTTC
Found at i:5722 original size:15 final size:15
Alignment explanation
Indices: 5664--5727 Score: 65
Period size: 15 Copynumber: 4.1 Consensus size: 15
5654 GAATTAGGGT
*
5664 TTTTTCTGGTTCGGG
1 TTTTTCGGGTTCGGG
* *
5679 TTTTATCGGGTTTCAGA
1 TTTT-TCGGG-TTCGGG
*
5696 TTTTTCGAGTTCGGG
1 TTTTTCGGGTTCGGG
*
5711 TTTTTTGGGTTCGGG
1 TTTTTCGGGTTCGGG
5726 TT
1 TT
5728 CAGGCGGGTT
Statistics
Matches: 39, Mismatches: 8, Indels: 4
0.76 0.16 0.08
Matches are distributed among these distances:
15 23 0.59
16 8 0.21
17 8 0.21
ACGTcount: A:0.06, C:0.11, G:0.31, T:0.52
Consensus pattern (15 bp):
TTTTTCGGGTTCGGG
Found at i:6575 original size:34 final size:34
Alignment explanation
Indices: 6528--6593 Score: 105
Period size: 34 Copynumber: 1.9 Consensus size: 34
6518 GAAACTCAAA
* * *
6528 AAAACTTGTTGGGAACTTTCCCAATTTGAAAATT
1 AAAACCTGGTGGGAACTCTCCCAATTTGAAAATT
6562 AAAACCTGGTGGGAACTCTCCCAATTTGAAAA
1 AAAACCTGGTGGGAACTCTCCCAATTTGAAAA
6594 CTTCGAAGAC
Statistics
Matches: 29, Mismatches: 3, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
34 29 1.00
ACGTcount: A:0.36, C:0.18, G:0.17, T:0.29
Consensus pattern (34 bp):
AAAACCTGGTGGGAACTCTCCCAATTTGAAAATT
Found at i:7334 original size:24 final size:27
Alignment explanation
Indices: 7313--7372 Score: 77
Period size: 29 Copynumber: 2.2 Consensus size: 27
7303 TCTTTTTGAA
7313 TTTA-AAGATCCTATTTTATTTGAAAAC
1 TTTACAAGATCCTATTTTATTTG-AAAC
**
7340 TTTACCAAGATCCTATTTTATTCCAAAC
1 TTTA-CAAGATCCTATTTTATTTGAAAC
7368 TTTAC
1 TTTAC
7373 TAATATTTAA
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
27 5 0.17
28 8 0.28
29 16 0.55
ACGTcount: A:0.33, C:0.18, G:0.05, T:0.43
Consensus pattern (27 bp):
TTTACAAGATCCTATTTTATTTGAAAC
Found at i:10529 original size:8 final size:8
Alignment explanation
Indices: 10518--10565 Score: 60
Period size: 8 Copynumber: 6.0 Consensus size: 8
10508 AATTGAGGCC
*
10518 TTGAATAA
1 TTGAAGAA
10526 TTGAAGAA
1 TTGAAGAA
*
10534 TTGAAGCA
1 TTGAAGAA
* *
10542 TCGAATAA
1 TTGAAGAA
10550 TTGAAGAA
1 TTGAAGAA
10558 TTGAAGAA
1 TTGAAGAA
10566 AGACCACCCT
Statistics
Matches: 33, Mismatches: 7, Indels: 0
0.82 0.17 0.00
Matches are distributed among these distances:
8 33 1.00
ACGTcount: A:0.48, C:0.04, G:0.21, T:0.27
Consensus pattern (8 bp):
TTGAAGAA
Found at i:10639 original size:67 final size:67
Alignment explanation
Indices: 10559--10685 Score: 159
Period size: 67 Copynumber: 1.9 Consensus size: 67
10549 ATTGAAGAAT
* * *
10559 TGAAGAAAGACCACCCTGGATCATTCTAAAAT-AAATTGAAGCAAGACCACCCTGGGTCAATGGA
1 TGAAGAAAGACCACCCTGAATCA-TCTAAAATCAAACTGAAGAAAGACCACCCTGGGTCAATGGA
10623 AAC
65 AAC
* ** *
10626 TGAAGAACA-ACCACCCTTAATCATCTTGACTCAAACTGAAGAAAGACCACCCTGGGTCAA
1 TGAAGAA-AGACCACCCTGAATCATCTAAAATCAAACTGAAGAAAGACCACCCTGGGTCAA
10686 CTGAAATAAA
Statistics
Matches: 51, Mismatches: 7, Indels: 4
0.82 0.11 0.06
Matches are distributed among these distances:
66 5 0.10
67 45 0.88
68 1 0.02
ACGTcount: A:0.39, C:0.25, G:0.17, T:0.18
Consensus pattern (67 bp):
TGAAGAAAGACCACCCTGAATCATCTAAAATCAAACTGAAGAAAGACCACCCTGGGTCAATGGAA
AC
Found at i:10865 original size:35 final size:35
Alignment explanation
Indices: 10805--11208 Score: 351
Period size: 35 Copynumber: 11.4 Consensus size: 35
10795 TAAGAGACAT
* *
10805 CACCCTGGATCGACTGAAATAAACTGAAGAAAGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* * *
10840 CGCCCTAGGTCAATTGAAA-ATAACTGAAGAAAGAC
1 CACCCTGGGTCAACTGAAATA-AACTGAAGAAAGAC
** * * *
10875 TGCCCTGGGTCAACTAAAATGAATTGAAGAAAGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* * ** * *
10910 CGCCCTGGGTTAGTTGAAATAAACTAAAGAATGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* * * *
10945 CACCCTCGATCATTCTGACATAAACTGAAGAAAAGAC
1 CACCCTGGGTCA-ACTGAAATAAACTGAAG-AAAGAC
** * * * *
10982 CACATTAGGTCAACTGGAATGAATTGAAGAAAGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* * * * **
11017 CATCCTTGATCATTCTGCCATAAACTGAAGAAAAGAC
1 CACCCTGGGTCA-ACTGAAATAAACTGAAG-AAAGAC
*
11054 CACCCTGGGTCAACTGAAATAAAATGAAGAAAGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* *
11089 CGCCCTGGGTCAACTGAAATAAACTGAAGAACGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
* * * * **
11124 CATCCTTGATCATTCTGTCATAAACTGAAGAAAAGAC
1 CACCCTGGGTCA-ACTGAAATAAACTGAAG-AAAGAC
*
11161 CACCCTGGGTCAACTGAAATAAACTGGAGAAAGAC
1 CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
*
11196 CATCCTGGGTCAA
1 CACCCTGGGTCAA
11209 TAAACCTTTG
Statistics
Matches: 287, Mismatches: 74, Indels: 16
0.76 0.20 0.04
Matches are distributed among these distances:
34 1 0.00
35 167 0.58
36 77 0.27
37 42 0.15
ACGTcount: A:0.40, C:0.22, G:0.20, T:0.19
Consensus pattern (35 bp):
CACCCTGGGTCAACTGAAATAAACTGAAGAAAGAC
Found at i:11018 original size:72 final size:72
Alignment explanation
Indices: 10924--11119 Score: 232
Period size: 72 Copynumber: 2.7 Consensus size: 72
10914 CTGGGTTAGT
* * * *
10924 TGAAATAAACTAAAGAATGACCACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACATTA
1 TGAAATAAAATGAAGAAAGACCACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTA
10989 GGTCAAC
66 GGTCAAC
* * * * * * * *
10996 TGGAATGAATTGAAGAAAGACCATCCTTGATCATTCTGCCATAAACTGAAGAAAAGACCACCCTG
1 TGAAATAAAATGAAGAAAGACCACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTA
11061 GGTCAAC
66 GGTCAAC
* * * * *
11068 TGAAATAAAATGAAGAAAGACCGCCCTGGGTCA-ACTGAAATAAACTGAAGAA
1 TGAAATAAAATGAAGAAAGACCACCCTCGATCATTCTGACATAAACTGAAGAA
11120 CGACCATCCT
Statistics
Matches: 103, Mismatches: 21, Indels: 1
0.82 0.17 0.01
Matches are distributed among these distances:
71 16 0.16
72 87 0.84
ACGTcount: A:0.43, C:0.20, G:0.18, T:0.19
Consensus pattern (72 bp):
TGAAATAAAATGAAGAAAGACCACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTA
GGTCAAC
Found at i:11087 original size:107 final size:106
Alignment explanation
Indices: 10818--11208 Score: 426
Period size: 107 Copynumber: 3.7 Consensus size: 106
10808 CCTGGATCGA
* * * * **
10818 CTGAAATAAACTGAAGAAAGACCGCCCTAGGTCAATTGAAA-ATAACTGAAGAAAGACTGCCCTG
1 CTGACATAAACTGAAGAAAGACCACCCTGGGTCAACTGAAATA-AACTGAAGAAAGACCACCCTG
* ** * * * *
10882 GGTCAACTAAAATGAATTGAAGAAAGACCGCCCTGGGTTAGT
65 GGTCAACTGAAATGAATTGAAGAAAGACCATCCTTGATCATT
* * * * * * * **
10924 -TGAAATAAACTAAAGAATGACCACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACATT
1 CTGACATAAACTGAAGAAAGACCACCCTGGGTCA-ACTGAAATAAACTGAAG-AAAGACCACCCT
* *
10988 AGGTCAACTGGAATGAATTGAAGAAAGACCATCCTTGATCATT
64 GGGTCAACTGAAATGAATTGAAGAAAGACCATCCTTGATCATT
* * *
11031 CTGCCATAAACTGAAGAAAAGACCACCCTGGGTCAACTGAAATAAAATGAAGAAAGACCGCCCTG
1 CTGACATAAACTGAAG-AAAGACCACCCTGGGTCAACTGAAATAAACTGAAGAAAGACCACCCTG
* * *
11096 GGTCAACTGAAATAAACTGAAGAACGACCATCCTTGATCATT
65 GGTCAACTGAAATGAATTGAAGAAAGACCATCCTTGATCATT
* * *
11138 CTGTCATAAACTGAAGAAAAGACCACCCTGGGTCAACTGAAATAAACTGGAGAAAGACCATCCTG
1 CTGACATAAACTGAAG-AAAGACCACCCTGGGTCAACTGAAATAAACTGAAGAAAGACCACCCTG
11203 GGTCAA
65 GGTCAA
11209 TAAACCTTTG
Statistics
Matches: 237, Mismatches: 43, Indels: 9
0.82 0.15 0.03
Matches are distributed among these distances:
105 28 0.12
106 12 0.05
107 156 0.66
108 26 0.11
109 15 0.06
ACGTcount: A:0.40, C:0.21, G:0.19, T:0.19
Consensus pattern (106 bp):
CTGACATAAACTGAAGAAAGACCACCCTGGGTCAACTGAAATAAACTGAAGAAAGACCACCCTGG
GTCAACTGAAATGAATTGAAGAAAGACCATCCTTGATCATT
Found at i:11194 original size:179 final size:178
Alignment explanation
Indices: 10817--11201 Score: 495
Period size: 179 Copynumber: 2.2 Consensus size: 178
10807 CCCTGGATCG
** * * * * * **
10817 ACTGAAATAAACTGAAGAAAGACCGCCCTAGGTCAAT-TG-AAAATAACTGAAGAAAGACTGCCC
1 ACTGAAATAAACTGAAGAAAGACCATCCTTGATCATTCTGCCATA-AACTGAAGAAAGACCACCC
* * * ** *
10880 TGGGTCAACTAAAATGAATTGAAGAAAGACCGCCCTGGGTTAGTTGAAATAAACTAAAGAATGAC
65 TGGGTCAACTAAAATAAAATGAAGAAAGACCGCCCTGGGTCAACTGAAATAAACTAAAGAACGAC
*
10945 CACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACATTAGGTCA
130 CACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTAGGTCA
* * *
10994 ACTGGAATGAATTGAAGAAAGACCATCCTTGATCATTCTGCCATAAACTGAAGAAAAGACCACCC
1 ACTGAAATAAACTGAAGAAAGACCATCCTTGATCATTCTGCCATAAACTGAAG-AAAGACCACCC
* *
11059 TGGGTCAACTGAAATAAAATGAAGAAAGACCGCCCTGGGTCAACTGAAATAAACTGAAGAACGAC
65 TGGGTCAACTAAAATAAAATGAAGAAAGACCGCCCTGGGTCAACTGAAATAAACTAAAGAACGAC
* * * * *
11124 CATCCTTGATCATTCTGTCATAAACTGAAGAAAAGACCACCCTGGGTCA
130 CACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTAGGTCA
*
11173 ACTGAAATAAACTGGAGAAAGACCATCCT
1 ACTGAAATAAACTGAAGAAAGACCATCCT
11202 GGGTCAATAA
Statistics
Matches: 175, Mismatches: 30, Indels: 4
0.84 0.14 0.02
Matches are distributed among these distances:
177 29 0.17
178 10 0.06
179 136 0.78
ACGTcount: A:0.41, C:0.21, G:0.19, T:0.19
Consensus pattern (178 bp):
ACTGAAATAAACTGAAGAAAGACCATCCTTGATCATTCTGCCATAAACTGAAGAAAGACCACCCT
GGGTCAACTAAAATAAAATGAAGAAAGACCGCCCTGGGTCAACTGAAATAAACTAAAGAACGACC
ACCCTCGATCATTCTGACATAAACTGAAGAAAAGACCACACTAGGTCA
Found at i:12997 original size:14 final size:14
Alignment explanation
Indices: 12975--13007 Score: 50
Period size: 14 Copynumber: 2.4 Consensus size: 14
12965 TGAAAACAAA
12975 TTTTG-GAAACCAT
1 TTTTGAGAAACCAT
*
12988 TTTTGAGAAATCAT
1 TTTTGAGAAACCAT
13002 TTTTGA
1 TTTTGA
13008 AAAGTCCTTT
Statistics
Matches: 18, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
13 5 0.28
14 13 0.72
ACGTcount: A:0.30, C:0.09, G:0.15, T:0.45
Consensus pattern (14 bp):
TTTTGAGAAACCAT
Found at i:13471 original size:2 final size:2
Alignment explanation
Indices: 13419--13455 Score: 65
Period size: 2 Copynumber: 18.5 Consensus size: 2
13409 GAACAGTAGA
*
13419 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AC AT AT A
1 AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT AT A
13456 CTAAAACTTA
Statistics
Matches: 33, Mismatches: 2, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
2 33 1.00
ACGTcount: A:0.51, C:0.03, G:0.00, T:0.46
Consensus pattern (2 bp):
AT
Done.