Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019583.1 Corchorus olitorius cultivar O-4 contig19616, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8412

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
596--640
12
3.6
12
93
6
72
0
0
15
84
0.62
3009--3056
8
6.0
8
77
0
51
47
6
20
25
1.73
3050--3549
35
14.1
35
78
8
494
40
24
18
16
1.91
3050--3549
71
7.1
70
78
11
454
40
24
18
16
1.91
5332--5364
14
2.4
14
90
5
50
30
9
15
45
1.77
5738--5778
2
20.5
2
84
0
55
51
2
0
46
1.14

Tables:   1

The End!