Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019600.1 Corchorus olitorius cultivar O-4 contig19633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16021

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
906--979
19
3.9
19
100
0
148
43
5
14
36
1.69
1007--1091
31
2.9
30
79
12
95
48
10
3
37
1.55
1553--1579
14
1.9
14
100
0
54
40
0
7
51
1.30
2575--2609
17
2.1
17
94
0
61
17
2
11
68
1.31
2575--2614
17
2.5
16
88
8
55
22
2
10
65
1.35
13281--13322
15
2.7
15
92
3
66
64
14
7
14
1.48

Tables:   1

The End!