Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019607.1 Corchorus olitorius cultivar O-4 contig19640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9938

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
981--1456
39
12.3
39
75
6
344
41
13
19
26
1.88
1252--1468
37
5.8
37
76
4
202
42
11
21
24
1.86
1121--1464
76
4.5
76
86
2
413
39
11
20
27
1.88
1512--2157
142
4.6
141
84
5
865
32
16
20
29
1.95
3028--3058
16
2.0
15
93
6
53
0
16
0
83
0.64

Tables:   1

The End!