Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019612.1 Corchorus olitorius cultivar O-4 contig19645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5429

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
358--669
44
7.3
44
77
11
294
18
26
16
37
1.93
375--656
82
3.3
83
84
7
336
20
26
18
35
1.95
673--1200
40
12.9
40
82
9
593
17
25
20
36
1.94
672--1200
121
4.3
120
83
7
604
17
25
20
36
1.94
673--1200
81
6.4
81
82
8
574
17
25
20
36
1.94
1128--1225
40
2.5
39
85
5
133
12
30
18
38
1.87
1201--1346
48
3.0
48
86
5
206
15
19
19
45
1.85

Tables:   1

The End!