Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019617.1 Corchorus olitorius cultivar O-4 contig19650, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14362

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--438
40
9.4
40
80
9
375
16
25
20
37
1.93
54--438
81
4.7
81
79
9
388
16
25
20
37
1.93
400--685
48
6.0
48
88
3
423
12
22
20
43
1.86
398--687
96
3.0
96
94
1
501
13
22
20
43
1.86
399--685
144
2.0
144
91
1
468
12
22
20
43
1.86
1504--1605
38
2.7
38
90
3
154
29
16
4
49
1.67
1791--1819
13
2.1
14
93
6
51
48
10
20
20
1.79
6109--6147
2
19.5
2
100
0
78
48
0
0
51
1.00
7458--7491
7
4.9
7
100
0
68
58
11
0
29
1.33
10329--10364
14
2.6
14
90
0
54
2
5
50
41
1.40
11316--11682
177
2.1
177
81
6
413
37
14
13
34
1.86
11882--11911
14
2.1
14
100
0
60
50
0
13
36
1.42
12470--12520
24
2.1
25
88
3
77
72
3
5
17
1.20

Tables:   1

The End!