Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019622.1 Corchorus olitorius cultivar O-4 contig19655, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8299

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2598--2628
16
1.9
16
93
0
53
38
25
12
22
1.90
4905--4936
2
16.0
2
93
0
55
53
0
0
46
1.00
6916--7149
35
6.6
36
79
6
203
20
21
17
40
1.91
7014--7066
26
2.1
26
82
3
63
20
20
18
39
1.92
7392--7572
30
6.0
30
88
0
263
20
12
21
45
1.84
7392--7567
60
2.9
60
94
0
307
20
12
21
45
1.84
7392--7572
90
2.0
90
92
0
299
20
12
21
45
1.84
7832--7895
21
3.0
21
82
8
83
12
56
20
10
1.66
7832--7895
23
2.9
23
86
4
87
12
56
20
10
1.66

Tables:   1

The End!