Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019627.1 Corchorus olitorius cultivar O-4 contig19660, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40298

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1068--1129
30
2.1
30
90
0
97
38
4
8
48
1.54
9980--10090
53
2.1
53
100
0
222
31
14
22
31
1.94
13548--13680
71
1.9
71
87
0
194
36
17
11
35
1.85
13619--13806
56
3.4
56
81
4
218
37
19
11
31
1.87
25939--26120
45
4.0
45
100
0
364
21
15
20
42
1.89
33966--34126
87
1.9
87
87
0
241
32
27
9
30
1.88

Tables:   1

The End!