Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019631.1 Corchorus olitorius cultivar O-4 contig19664, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36650

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11139--11274
64
2.0
68
88
6
208
41
8
22
27
1.82
21331--21564
25
9.4
25
87
3
285
29
29
21
19
1.98
21324--21564
75
3.2
75
87
3
333
29
28
21
20
1.98
21454--21577
25
5.0
25
91
0
77
30
29
20
20
1.97
34044--34160
58
2.0
58
96
0
216
45
15
23
15
1.84
34185--35700
666
2.3
665
91
2
2451
31
14
18
36
1.90
34185--35700
332
4.6
331
91
2
2432
31
14
18
36
1.90
35513--35878
185
2.0
185
86
4
515
29
15
19
35
1.93

Tables:   1

The End!