Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019647.1 Corchorus olitorius cultivar O-4 contig19680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29654

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
642--784
71
2.0
71
98
0
277
32
23
16
27
1.95
988--1017
8
3.8
8
100
0
60
0
26
10
63
1.26
11376--11557
90
2.0
89
97
1
346
31
23
9
35
1.87
16202--16283
22
3.7
22
91
0
110
23
43
28
4
1.74
18373--18496
66
1.9
66
96
0
230
31
21
20
25
1.98
18627--18718
42
2.4
37
73
18
87
25
19
28
27
1.99
18648--18816
42
4.0
42
86
3
232
21
19
31
26
1.97
19875--19904
14
2.1
14
93
0
51
46
0
3
50
1.18
28000--28058
19
3.0
19
80
9
82
32
20
10
37
1.86

Tables:   1

The End!