Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019652.1 Corchorus olitorius cultivar O-4 contig19685, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13739

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--3509
998
3.5
992
91
2
5658
37
14
14
34
1.86
6897--6944
7
6.9
7
92
0
69
4
10
0
85
0.73
6897--6950
21
2.6
21
84
0
72
5
9
1
83
0.88
6898--6950
14
3.8
13
80
11
52
5
9
1
83
0.89
7055--7118
29
2.2
28
83
5
83
21
20
14
43
1.87
8747--8830
31
2.6
31
74
7
89
14
16
35
33
1.89
9442--9473
2
16.5
2
93
6
57
53
0
0
46
1.00

Tables:   1

The End!