Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019655.1 Corchorus olitorius cultivar O-4 contig19688, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31096

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1411--1478
34
2.0
34
88
0
100
29
14
8
47
1.75
2539--2567
5
6.0
5
96
4
51
82
0
17
0
0.66
17371--17547
87
2.0
87
81
2
203
18
25
19
36
1.94
18114--18185
35
2.1
35
100
0
144
44
19
16
19
1.87
18818--18877
30
2.0
30
93
0
102
28
21
16
33
1.95
24178--24328
74
2.0
74
94
0
266
35
11
18
33
1.88
30727--30793
21
3.2
21
66
16
57
52
11
1
34
1.48

Tables:   1

The End!