Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01019661.1 Corchorus olitorius cultivar O-4 contig19694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17377

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--1054
341
3.1
340
88
3
1396
35
14
15
33
1.89
1534--1587
27
2.0
28
86
13
78
62
3
11
22
1.43
8821--8867
5
9.8
5
84
6
53
0
29
0
70
0.88
15021--15195
87
2.0
87
94
0
305
36
13
17
32
1.89
15040--15223
87
2.1
86
81
6
203
44
11
14
29
1.81
15957--16006
25
2.0
24
85
11
66
40
6
12
42
1.67
16135--16239
31
3.5
30
73
10
97
34
19
20
26
1.96
16317--16413
28
3.3
28
70
14
88
27
19
18
34
1.95
16345--16448
31
3.5
29
71
12
86
25
19
20
35
1.95
16282--16444
60
2.7
60
89
3
231
26
17
18
36
1.93

Tables:   1

The End!